cd /Users/xiaolu/Documents/Python_code/vulnAgentX
python3 -m venv .venv
source .venv/bin/activate
python -m pip install -e '.[dev]'

.venv/bin/vulnagentx analyze --repo /path/to/repo --output json

.venv/bin/vulnagentx analyze --diff-file /path/to/patch.diff --output json

.venv/bin/vulnagentx analyze --repo /path/to/repo --output summary

.venv/bin/uvicorn vulnagentx.app.api:app --reload

curl http://127.0.0.1:8000/health

curl -X POST http://127.0.0.1:8000/analyze \
  -H "Content-Type: application/json" \
  -d '{"repo_path":"/path/to/repo"}'

docker compose -f docker/docker-compose.yml up --build

.venv/bin/ruff check src tests
.venv/bin/mypy src
.venv/bin/pytest

{
  "run_id": "...",
  "findings": [
    {
      "issue_type": "command_injection",
      "location": {"file_path": "app.py", "start_line": 42, "end_line": 42},
      "evidence_summary": "Command execution surface detected...",
      "confidence": 0.87,
      "severity": "critical",
      "optional_cwe": "CWE-78",
      "fix_hint": "Avoid shell command composition...",
      "source_agents": ["security_agent", "semantic_agent"],
      "evidence_chain": [],
      "counter_evidence": []
    }
  ],
  "metrics": {
    "runtime_seconds": 0.07
  },
  "logs": []
}