$ find /your/malware/dataset/path -type f -exec python r2_batch.py {} ';'

$ find /your/malware/dataset/path -type f | parallel -j 8 ida64 -B -A -S/path/to/ida_batch.py {}

$ cat config.cfg 
########################################################################
# Configuration for SQLite3
########################################################################
[database]
dbn=sqlite
# Database name
db=db.sqlite

########################################################################
# Example configuration for MySQL
########################################################################

[database]
dbn=mysql
# Database hostname or IP address
host=localhost
# Database name
db=db_name
# Database username
user=username
# Database password
pw=password

$ cd $COSA_NOSTRA_DIR
$ ./cn_clusterer.py
(...)
Calculating difference matrix for 2357, iteration 5540280 out of 7507600 (4858784 matches, 600144 cache misses)
Calculating difference matrix for 2354, iteration 5543020 out of 7507600 (4861293 matches, 600373 cache misses)
Calculating difference matrix for 471, iteration 5545760 out of 7507600 (4863903 matches, 600373 cache misses)
(...)
Making tree for group with 59 sample(s), iteration 0 out of 256
Making tree for group with 393 sample(s), iteration 1 out of 256
Making tree for group with 1347 sample(s), iteration 2 out of 256
(...)
[Wed Nov  2 13:37:12 2016 2830:140561185462080] Creating unnamed cluster...
[Wed Nov  2 13:37:12 2016 2830:140561185462080] Creating cluster with name u'Win.Trojan.Skylock-4'...
[Wed Nov  2 13:37:12 2016 2830:140561185462080] Creating cluster with name u'Win.Downloader.133181-1'...
[Wed Nov  2 13:37:12 2016 2830:140561185462080] Creating cluster with name u'Win.Trojan.Agent-1213378'...
[Wed Nov  2 13:37:13 2016 2830:140561185462080] Done processing phylogenetic trees!
[Wed Nov  2 13:37:13 2016 2830:140561185462080] Done

$ cd $COSA_NOSTRA_DIR
$ python cosa_nostra.py [optional port to listen to]
http://0.0.0.0:YOURPORT/

$ cat config.py
#!/usr/bin/env python

#-----------------------------------------------------------------------
# Configuration for Cosa Nostra
#-----------------------------------------------------------------------
DEBUG=False
CN_USER="admin"
# SHA1 hash of the password "cosanostra", change to the SHA1 hash of
# whatever password you prefer.
CN_PASS="048920dedfe36c112d74dc8108abb4db5185a918"
(...)